rs30624822 SNP Detail

Summary

• ID
  rs30624822
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145286730 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  GGGAGGCAGA GGCAGGTGAA TTTCTGAGTT CAAGGTCAAC CTGGTCTACA GAGTGAGTTC
  CAGGATTGCC AAGGCTACAT AGAGAAACCC TATCTCAAAA AAACAAACAA CAACAAAAAA
  ACAAAAACAA AACAGAAAAA AAGAAGGAGG AGGAGGAAGA GCAGGAGGAG GAGGAGAAAG
  AGCAGCAGCA GGAGGAGGAG GAGGAGGAGG AGGAGGAGGA GGAAAGTATC ATCATTGTAG
  CTTCCACAAT CACAGGACCC TTTCAGACAC AGGTGGGAGA TGCTTGTCAA CATCTACATC
  M
  TTTGCAGCTG AGGATGTAAC TGAAGTCACT GTGGTACAGC AACAATTCTA ATTCAAAATG
  TCCATCCTCT TCACTGATTA AAAACTAAAG ATGTATATGT ATAAATTTTA TTTACCTATG
  TGTAAATGTT GCTATGTTAT TAATGTTGCT AGAAAAACAC ATTTCTTTGA ATATTTTGGA
  TAATTGAATG GGGTATGCCT TCCAGTCAAT CACAGTTCTA CTGACTCTGG AAGACGAATA
  GCTCATTGCT GTCAAAGTAG AACACCTGAA GATCTATGGC CTGTTTGAAA AGATTTGCCA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J
ss46426277	mCV25374530	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J
rs30624822					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145286730 () rs orientation: reverse

Symbol	Name	Function Class
Gm21978	predicted gene 21978	469 bp upstream
Rr398684	regulatory region 398684	1910 bp downstream