rs30631149 SNP Detail

Summary

• ID
  rs30631149
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55207260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCTCCCT CCCCTGCTGT
  TTTTGCTATT GGTAACCAAC TCTTCATCCT CAGCACAGGG CCCATGCTCT GGTTGCCTAG
  CTCAGTGGTC AGAACACAGA GGGCTGTTGA ACAGGAGTCT GGCCACACAT GAGTGTGTCT
  GTAGGTGGGG TTGAGGGGAG ACTCAAAGAG ATGTCTTCCA ATCCCATTGT CTTTCAGACC
  Y
  ACATTCCTAA AGCTACCCCG AGCAGCCCAG CTGTGGCAGA GTATCTCGGG AACTAGCTTG
  GCTTAGCTGG AGCGGACTCA CTCACTCTTT TTTCTACCCC CAGGCCCGCC AGTGATTTAG
  TTCCTGATCC TTCCAAAATC TGGTCCCCCT GTTGTCTGCT TTCTCTTGAG ATGGCTTGCC
  ACACCTAGGG CCAAACTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39205267	mCV23144779	ABI	CRAMUS_MOUSE	f	SNP		C					T		T
ss52723005	NES15567957	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C		C	T	T	C		T	T	C	C		T
ss139574375	ENSMUSSNP4278781	ENSEMBL	ENSEMBL_Sanger	f	SNP		C							T
ss324641240	CHEV_14_55588640	CHEVERUD	SCREENING_POP	f	SNP												C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30631149					SNP	C	C	C	C	C	C	T	C	T	T	C	C	T	T	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723005	NES15567957	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55207260 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	881 bp downstream
Rr492380	regulatory region 492380	998 bp distal
Rr492381	regulatory region 492381	within coordinates
Tssr125718	transcription start site region 125718	1120 bp downstream
Tssr125719	transcription start site region 125719	1028 bp downstream
Tssr125720	transcription start site region 125720	1003 bp downstream
Tssr125721	transcription start site region 125721	991 bp downstream
Tssr125722	transcription start site region 125722	543 bp downstream
Tssr125723	transcription start site region 125723	501 bp downstream
Tssr125724	transcription start site region 125724	461 bp downstream
Tssr125725	transcription start site region 125725	364 bp upstream
Tssr125726	transcription start site region 125726	389 bp upstream
Tssr125727	transcription start site region 125727	422 bp upstream
Tssr125728	transcription start site region 125728	1230 bp upstream
Tssr128746	transcription start site region 128746	1828 bp upstream
Tssr128747	transcription start site region 128747	1804 bp upstream
Tssr128748	transcription start site region 128748	1760 bp upstream
Tssr128749	transcription start site region 128749	1729 bp upstream
Tssr128750	transcription start site region 128750	1707 bp upstream
Tssr128751	transcription start site region 128751	1701 bp upstream
Tssr128752	transcription start site region 128752	1642 bp upstream
Tssr128753	transcription start site region 128753	1443 bp upstream
Tssr128754	transcription start site region 128754	1373 bp upstream
Tssr128755	transcription start site region 128755	912 bp downstream
Tssr128756	transcription start site region 128756	929 bp downstream