rs30643136 SNP Detail

Summary

• ID
  rs30643136
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153628092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTG GAGTGGGCTT TTCCCTCCCA
  K
  ATCAGAGTCC CCTGATTTTC TTCCC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44948613	mCV24629791	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30643136					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153628092 () rs orientation: forward

Symbol	Name	Function Class
Gm28512	predicted gene 28512	582 bp downstream
Rnasel	ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	within coordinates
Rr396400	regulatory region 396400	349 bp downstream
Tssr9483	transcription start site region 9483	470 bp downstream
Tssr9484	transcription start site region 9484	439 bp downstream
Tssr9485	transcription start site region 9485	346 bp downstream
Tssr9486	transcription start site region 9486	312 bp downstream
Tssr9487	transcription start site region 9487	437 bp upstream
Tssr9488	transcription start site region 9488	464 bp upstream
Tssr9489	transcription start site region 9489	506 bp upstream
Tssr9490	transcription start site region 9490	642 bp upstream