rs30647097 SNP Detail

Summary

• ID
  rs30647097
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127654733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGCTCTCT GACTAGCCAA
  GGTGACAGGC CATATGAAGT GTGCCTACAC TCCGAGGACT CAGCAGACCC GTGTTTCTGG
  TTTGAGTATT CTGGCAGTCA CACACAGACA GAGACATGAC TCATGTGTGA AGGATAGTGC
  TTTCAGGGGT CATTTTACTC AATTTCCAGA GACCATAGAG CACTGCAGAC ATCAGGAAAT
  R
  GTGCTAGGAA AGCCCCTGTA ATTGCAACCA AGACTTAAAG TCTAGGTCTC TGTCTCGTTT
  CTTCCTACTC TTCCTCCTCC TTCTTTTTCC TCTCTCTTCT CTCTCTTTCC TCCCCTCTTC
  CTCTTCCTTT GCCTCCACCC CCTTCTAAGT ATTTCTGTCA TTTTTAAAAA CTGTCTTTTG
  TAACAGTTTT TAAGGCTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45450125	mCV24302391	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss135873371	ENSMUSSNP8053	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss320957590	CHEV_3_127564002	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30647097					SNP	A	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127654733 () rs orientation: forward

Symbol	Name	Function Class
Gm35585	predicted gene, 35585	within coordinates
Rr584887	regulatory region 584887	314 bp proximal
Rr584888	regulatory region 584888	1429 bp proximal
Tssr31614	transcription start site region 31614	501 bp upstream