rs30648982 SNP Detail

Summary

• ID
  rs30648982
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129874712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTGTTTC TCCAGCAGAA
  CTCAGTACTG TCACTACTTT AGTGGGGAGC AGGAAGGCTC AGAGGGTGGT GGCTACAGGT
  GGTGTAGTAG ACACCCCAGC CCCGCCAGCT AGTGGTCTTC CAGCTTACCC TGTGTTTCAG
  ATGTGTGATA CCCCACTGTA TTGTCAGTGG GGAAAGCCAG ACTAGGGTGC TGGTCCACAC
  R
  ATAGCATATA GTATTGTTGC CTGCACACAA GTTGACTCAA AAGACAAATA TAATTTGGCT
  ACGTGTTGGG GTGTCTGGAG AAAGGTGTAT CAGAGGAAAA AAAAAAAGGC TATCGGCAGC
  CGTGGTAACC AGAGTCTCCC AGCTTCTCCC AGCTTCTCCC AGCGTTCTAC CTGCTGCATG
  TGGCCGTTCA CATGGTGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46970009	NES10879461	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30648982					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46970009	NES10879461	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129874712 () rs orientation: forward

Symbol	Name	Function Class
Gm42663	predicted gene 42663	within coordinates
Rr585128	regulatory region 585128	951 bp distal
Rr585129	regulatory region 585129	1051 bp distal