rs30649528 SNP Detail

Summary

• ID
  rs30649528
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135154117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTC CCCAGGAGTC GAGCAAGGAA
  R
  GGACTCCCTC TCCAGCTCAG AGGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44949616	mCV25096539	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss145527778	ENSMUSSNP5168484	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss319988601	CHEV_1_137122956	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30649528					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135154117 () rs orientation: forward

Symbol	Name	Function Class
Rr419105	regulatory region 419105	1793 bp distal
Rr419106	regulatory region 419106	702 bp distal
Rr419107	regulatory region 419107	683 bp proximal