rs30655265 SNP Detail

Summary

• ID
  rs30655265
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52818340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGTGTTTGT CAGTGTTCAT TATCAGTCTG TGGAGATAAT
  CAGACTGGAC TTCTCTAGAT TGCCTGAAAT CACTGTAGGG AGGAAAGCAA TGGCTGGAGA
  M
  TGGCAGCCTG ATGGTCTTCT GCTGGTTCCT TCTGCACAGG TGTGAGCAGA GGCGAGCAGG
  TGGAGCAGCG CCCTCCTCAC CTGAGTGTCC GGGAGGGAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39208101	mCV23549509	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C
ss139509589	ENSMUSSNP1562640	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30655265					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52818340 () rs orientation: forward

Symbol	Name	Function Class
Rr491934	regulatory region 491934	264 bp distal
Rr491935	regulatory region 491935	355 bp distal
Tcra	T cell receptor alpha chain	within coordinates
Trav3-1	T cell receptor alpha variable 3-1	within coordinates
Tssr125465	transcription start site region 125465	293 bp downstream