rs30656399 SNP Detail

Summary

• ID
  rs30656399
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171577043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAT ATGAAGGTCC ATGCTGGCTT
  Y
  CAGGATCCCC CAGTCCTTAC TCACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44950507	mCV24403604	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss120002653	PARCsnp_1.15404	PARC_SEQ	INBRED	f	SNP			C	T
ss120005031	PARCsnp_1.04784	PARC_SEQ	INBRED	f	SNP			C	T
ss146173643	ENSMUSSNP1446654	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss320120652	CHEV_1_173679606	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30656399					SNP	T	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171577043 () rs orientation: forward

Symbol	Name	Function Class
Rr423388	regulatory region 423388	555 bp distal