rs30656471 SNP Detail

Summary

• ID
  rs30656471
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:126768525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTAA AACTTCTCTG CAAGAGCAAT
  R
  TATAAAGTAA AAAAGATAGC TAGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45950616	mCV25323502	ABI	CRAMUS_MOUSE	f	SNP		G					A		G
ss51411617	NES13709720	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	A	G		A	G	G	G		G	G	A	A		A
ss133625958	ENSMUSSNP696003	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							G
ss321939931	CHEV_6_126741580	CHEVERUD	SCREENING_POP	f	SNP												G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30656471					SNP	A	G	G	G	A	G	A	A	G	G	G	G	G	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51411617	NES13709720	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:126768525 () rs orientation: forward

Symbol	Name	Function Class
Gm29788	predicted gene, 29788	887 bp downstream
Gm67331	predicted gene, 67331	within coordinates
Rr638910	regulatory region 638910	456 bp proximal
Rr638911	regulatory region 638911	526 bp proximal