rs30659811 SNP Detail

Summary

• ID
  rs30659811
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115435078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAATAAAG CCTGTCACCC
  AGCAATCTTT TGTTAGTGTC CTTCCACCCC CAAATATTCC TCCCATTGTA TTCTTTCTCT
  CTTCCTTTCT ATTAGTTGAA TCTATTTCCT GACAGTTTCA TACAAGTACA TAGTTCATTT
  GGTTACTTGC ATCCCTTCCA CCCTCTCTTA CTCTCCCATC CCTCCCTCTC CTCCGTACAA
  R
  TCCCTTACCA GCTCCTGGTA TATTGTTCTG TTTTGTGAAC CACTGATTTT AACCAGGGCT
  ATCTGTGTGT CTGCAGAACT CTCCTCTGGA GCCTAGCTGG CTCACCTTGG GTACACAACT
  GAAGACAATG ACTATCCCTT CCCAGAATCC ACCAGTCACT GAGAACCTTT TCCTGTCCGT
  GGTTAGCTGT TGATAAGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss45453053	mCV24998085	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs30659811					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115435078 () rs orientation: forward

Symbol	Name	Function Class
Gm40124	predicted gene, 40124	within coordinates
Rr65099	regulatory region 65099	278 bp distal
Rr367536	regulatory region 367536	900 bp upstream
Rr367537	regulatory region 367537	1299 bp upstream
Tssr35264	transcription start site region 35264	81 bp downstream
Tssr35265	transcription start site region 35265	114 bp downstream