rs30659919 SNP Detail

Summary

• ID
  rs30659919
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:121093414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATA ACAACAACAG AAATACATTC
  M
  AACAAAAATT GAAATAACAA CAACA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45950946	mCV23009463	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A
ss133600961	ENSMUSSNP1980551	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		A
ss321931630	CHEV_6_121066472	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30659919					SNP	C	C	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:121093414 () rs orientation: forward

Symbol	Name	Function Class
D6Mit216	DNA segment, Chr 6, Massachusetts Institute of Technology 216	1067 bp distal
Gm57772	predicted gene, 57772	within coordinates
Mical3	microtubule associated monooxygenase, calponin and LIM domain containing 3	within coordinates
Minpp1-ps	multiple inositol polyphosphate histidine phosphatase 1, pseudogene	657 bp upstream