rs30659922 SNP Detail

Summary

• ID
  rs30659922
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18793229 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGCAGAT TCAGACATGG
  ATTCTTTGAA GGAACCACAC CTCAACCCAA GAGGGCAGCT GTTGCAGTAT CCAGTTCATC
  TTGAGGGTTT CAGTCAGTCA TAAAATAAAT GTTTGGGTTC CAATCAAAAC AAACAAACAA
  TGACAACAGA AAAGCAGCTG AAAACCTCAA ATGATTGAAT CCACAAGTAG ACAAATTAAT
  Y
  TCAAAAGAAG AATTACAAAT ATATTACCAA TAAGTGCAAG ACAAAATATT CATCTTTATA
  AAGAGAATGT AAACCAAAAG TATATTGAGA TTCCAGCTCA CTACACTCCG AATGGCTATC
  ATCAAGCAAT ATGCTATGCA TGCTTTCAAG GCTGTGGGAG CAAAGAATGC TTGCTTGGAA
  TATAAATTAG TCTAACAAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45950949	mCV23957246	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss133041147	ENSMUSSNP1014464	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30659922					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18793229 () rs orientation: forward

Symbol	Name	Function Class
Gm43228	predicted gene 43228	116 bp downstream