rs30663634 SNP Detail

Summary

• ID
  rs30663634
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:87405445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTG ATGTCTACTT AACTTGGAGT
  Y
  ATTGGCTATT TAGTCCATCT TTGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45951281	mCV24930603	ABI	CRAMUS_MOUSE	f	SNP	C	C					T		C
ss51740632	NES14797040	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	C	C		T	C	C		T	C	C	T		T
ss133363455	ENSMUSSNP3458561	ENSEMBL	ENSEMBL_Sanger	f	SNP		C							C
ss321849197	CHEV_6_87378457	CHEVERUD	SCREENING_POP	f	SNP											T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30663634					SNP	C	C	T	T	C	C	T	T	C	C	T	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51740632	NES14797040	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:87405445 () rs orientation: forward

Symbol	Name	Function Class
Bmp10	bone morphogenetic protein 10	531 bp upstream
Gm66434	predicted gene, 66434	within coordinates
Tssr57543	transcription start site region 57543	523 bp upstream
Tssr57544	transcription start site region 57544	613 bp upstream