rs30664089 SNP Detail

Summary

• ID
  rs30664089
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82929000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTG GAGGTACAGG CATGTAATCA
  Y
  AATTACTATG GAGGCTGAGG CAGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45951876	mCV23177974	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss133345725	ENSMUSSNP5368152	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss321843720	CHEV_6_82902013	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30664089					SNP	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82929000 () rs orientation: forward

Symbol	Name	Function Class
Gm19287	predicted gene, 19287	761 bp upstream
M1ap	meiosis 1 associated protein	within coordinates
Tssr57262	transcription start site region 57262	718 bp upstream