rs30665102 SNP Detail

Summary

• ID
  rs30665102
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50582621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTGTATT GGGACATATA
  ATCTTTGAAA GACCAAGGGA TTCTCCTCCC AATGATGGGT GATTAGGTCA TCTTCTGCTA
  CATATGCAGT TAGAGACAAG AGCTGAGTGG GTATTGATTT GTACGTATTG CTGTTCCTCT
  TATAGGAAAG CAGACGCTTC AGCTCCTTGG GTCGTTTCTC TAGCTCCTCC ATTGGGGGCC
  M
  TGTGTTCCAT TCAATAGCTG ACTCTGAGCC TCCACTTCTG TATTTGCCAG GCACTGCATA
  GCCTCACTAC ATTCAGCTAT ATCAGGGTCC TGTCAGCAAA ATCTTCCTGG CATATGTAAT
  AGTGTCTGCA TTTGGTGGCT GATTATGGTC TGGATCCCTG GGTGGGGCAG TCTCTGCATG
  GTCCTTCCTT TCGTCTCAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45952736	mCV24540490	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A	A
ss133182466	ENSMUSSNP2393240	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30665102					SNP	C	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50582621 () rs orientation: forward

Symbol	Name	Function Class
Gm38807	predicted gene, 38807	1942 bp upstream
Rr379340	regulatory region 379340	1555 bp upstream