rs30667211 SNP Detail

Summary

• ID
  rs30667211
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCTGGAATAT GGCGAAAAAA CTGAAAATCA TGGGAAAATG AGAAATACAC ACTTTAGGAC
  GTGAAATATG GCGAGGAAAA CTGAAAAAGG TGGAAAATTT AGAAATGTCC ACTGTGGGAC
  ATGGAATTTG GCAAGAAAAC TGAAAATAAT TTAAAATGTG AAACATCCAC TTGACGACTT
  GAAATATGAC GAAATCACAG AAAAACGTGA AAAATGAGAA ATGCACACTG TAGGACGTGG
  AATATGGCGA GAAAACTGAA AATCACGGAA AATGAGAAAT ACACACTTTA GGACGTGAAA
  W
  ATGGCGAGGA AAACTGAAAA AGGCAGAAAA TTTAGAAATT TCCACTGTGG GACATGGAAT
  AAGGCAAGAA AACTGAAAAT CATGGAAAAT GTGAAACATC CACTTGACGA CTTGAAAAAT
  GAGGAAATCA CGGAATAACG TGAAAAATGA GAAATGCACA GTGTAGGACA TGGAATATGA
  TGAGAAAACT GAAAATCACG GAAAATGAGA AACATCCACT TGATGACTTG AAAAATGACG
  AAATCACTGA AAAACGTGAA AAATTAGAAA TGCACAGTGT AGGACCTAGG ACATGGTGAG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46431604	mCV22985229	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss46435057	mCV22537179	ABI	CRAMUS_MOUSE	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30667211					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050406 () rs orientation: forward

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1920 bp downstream
Tssr4285	transcription start site region 4285	1895 bp upstream
Tssr4286	transcription start site region 4286	1791 bp downstream
Tssr4287	transcription start site region 4287	1756 bp upstream
Tssr4288	transcription start site region 4288	1728 bp downstream
Tssr4289	transcription start site region 4289	1633 bp upstream
Tssr4290	transcription start site region 4290	1626 bp downstream
Tssr4291	transcription start site region 4291	1546 bp upstream
Tssr4292	transcription start site region 4292	1510 bp downstream
Tssr4293	transcription start site region 4293	1475 bp upstream
Tssr4294	transcription start site region 4294	1473 bp downstream
Tssr4295	transcription start site region 4295	1400 bp upstream
Tssr4296	transcription start site region 4296	1437 bp downstream
Tssr4297	transcription start site region 4297	1373 bp upstream
Tssr4298	transcription start site region 4298	1355 bp downstream
Tssr4299	transcription start site region 4299	1315 bp downstream
Tssr4300	transcription start site region 4300	1277 bp downstream
Tssr4301	transcription start site region 4301	1259 bp upstream
Tssr4302	transcription start site region 4302	1247 bp upstream
Tssr4303	transcription start site region 4303	1192 bp downstream
Tssr4304	transcription start site region 4304	1163 bp upstream
Tssr4305	transcription start site region 4305	1094 bp downstream
Tssr4306	transcription start site region 4306	1075 bp upstream
Tssr4307	transcription start site region 4307	1054 bp downstream
Tssr4308	transcription start site region 4308	1022 bp upstream
Tssr4309	transcription start site region 4309	978 bp upstream
Tssr4310	transcription start site region 4310	931 bp downstream
Tssr4311	transcription start site region 4311	903 bp upstream
Tssr4312	transcription start site region 4312	823 bp downstream
Tssr4313	transcription start site region 4313	764 bp upstream
Tssr4314	transcription start site region 4314	752 bp downstream
Tssr4315	transcription start site region 4315	728 bp downstream
Tssr4316	transcription start site region 4316	701 bp upstream
Tssr4317	transcription start site region 4317	625 bp downstream
Tssr4318	transcription start site region 4318	601 bp upstream
Tssr4319	transcription start site region 4319	544 bp upstream
Tssr4320	transcription start site region 4320	480 bp downstream
Tssr4321	transcription start site region 4321	452 bp upstream
Tssr4322	transcription start site region 4322	353 bp downstream
Tssr4323	transcription start site region 4323	318 bp upstream
Tssr4324	transcription start site region 4324	288 bp downstream
Tssr4325	transcription start site region 4325	237 bp downstream
Tssr4326	transcription start site region 4326	199 bp upstream
Tssr4327	transcription start site region 4327	196 bp downstream
Tssr4328	transcription start site region 4328	114 bp downstream
Tssr4329	transcription start site region 4329	116 bp upstream
Tssr4330	transcription start site region 4330	within coordinates
Tssr4331	transcription start site region 4331	11 bp downstream
Tssr4332	transcription start site region 4332	117 bp downstream
Tssr4333	transcription start site region 4333	129 bp upstream
Tssr4334	transcription start site region 4334	151 bp downstream
Tssr4335	transcription start site region 4335	298 bp downstream
Tssr4336	transcription start site region 4336	302 bp upstream
Tssr4337	transcription start site region 4337	375 bp downstream