rs30667692 SNP Detail

Summary

• ID
  rs30667692
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:56482551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCTTACTCA ATTTAAAGGC AGGAATAGCT TCAGGGGTCA
  CTCCATGGTT GCTTGGCCTA TGTTATGGGT TGCATCAATG CAACATTTCA AGGCACAAGC
  Y
  TGTGGTGAAG GAGGCCTGCT CACCTCATAT GTGTCCTAGA AGCAAAGGGA AGGAGGAGGA
  ACTTGGGTCC CTGAACCCAC TCGAGGACAT ACTCGAGGAC                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss46972042	NES10793612	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs30667692					SNP	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46972042	NES10793612	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:56482551 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13194	CpG island 13194	344 bp proximal
Rr577050	regulatory region 577050	319 bp proximal
Tssr29179	transcription start site region 29179	376 bp upstream
Tssr29180	transcription start site region 29180	530 bp upstream
Tssr29181	transcription start site region 29181	560 bp upstream