rs30670674 SNP Detail

Summary

• ID
  rs30670674
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGAAAAATG AAAAATGCAC ACTGTAGGAC CTGGAATATG GCGAGTAAAG CTGAAAATCA
  CGGCAAAATG AGAAATACAC AATTTAGGAC GTGAAATATG GCAAGGAAAA CTGAAAAAAG
  TGGAAAATTT AGAAATGTCC ACTGTAGGAC ATGGAATATG ACAAGAAAAC TGAAAATCAT
  GGAAAATGAG AAACATCCAC TTGACGACTT GAAAAATGAC GAAATCACTG AAAAACATGA
  AAAATGAGAA ATGCACACTG TAGGACCTGA AAAATGGCGA GAAAACTGAA AATCACGGAA
  W
  ATGAGAAATA CATACTTTAG GTCGTGAAAT ATGGCGAGGA AAACTAAAAA AGGTGGAAAA
  TTTAGAAATG TCCACTGTAG GACATGGAAT ATGGCAAGAA AACTGAAAAT CATGGAAAAT
  GAGAAACATC CACTTGACCA CTTGAAAAAT GACGAAATCA CTGAAAAACG TGAAAATTTA
  TAAATGTCCA CTGTAGGACA TGGAATATGG AAAGAAAACT GAAAATCATG GAAAATGAGA
  AACATCCACT TGACGACTTG AAAAATGACG AAATCAGAGA AAAACGTGGG AAAATGAGAA
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46431331	mCV22806040	ABI	CRAMUS_MOUSE	f	SNP		A	T
ss46431561	mCV25384786	ABI	CRAMUS_MOUSE	r	SNP	T			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30670674					SNP	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050436 () rs orientation: forward

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1890 bp downstream
Tssr4285	transcription start site region 4285	1865 bp upstream
Tssr4286	transcription start site region 4286	1761 bp downstream
Tssr4287	transcription start site region 4287	1726 bp upstream
Tssr4288	transcription start site region 4288	1698 bp downstream
Tssr4289	transcription start site region 4289	1603 bp upstream
Tssr4290	transcription start site region 4290	1596 bp downstream
Tssr4291	transcription start site region 4291	1516 bp upstream
Tssr4292	transcription start site region 4292	1480 bp downstream
Tssr4293	transcription start site region 4293	1445 bp upstream
Tssr4294	transcription start site region 4294	1443 bp downstream
Tssr4295	transcription start site region 4295	1370 bp upstream
Tssr4296	transcription start site region 4296	1407 bp downstream
Tssr4297	transcription start site region 4297	1343 bp upstream
Tssr4298	transcription start site region 4298	1325 bp downstream
Tssr4299	transcription start site region 4299	1285 bp downstream
Tssr4300	transcription start site region 4300	1247 bp downstream
Tssr4301	transcription start site region 4301	1229 bp upstream
Tssr4302	transcription start site region 4302	1217 bp upstream
Tssr4303	transcription start site region 4303	1162 bp downstream
Tssr4304	transcription start site region 4304	1133 bp upstream
Tssr4305	transcription start site region 4305	1064 bp downstream
Tssr4306	transcription start site region 4306	1045 bp upstream
Tssr4307	transcription start site region 4307	1024 bp downstream
Tssr4308	transcription start site region 4308	992 bp upstream
Tssr4309	transcription start site region 4309	948 bp upstream
Tssr4310	transcription start site region 4310	901 bp downstream
Tssr4311	transcription start site region 4311	873 bp upstream
Tssr4312	transcription start site region 4312	793 bp downstream
Tssr4313	transcription start site region 4313	734 bp upstream
Tssr4314	transcription start site region 4314	722 bp downstream
Tssr4315	transcription start site region 4315	698 bp downstream
Tssr4316	transcription start site region 4316	671 bp upstream
Tssr4317	transcription start site region 4317	595 bp downstream
Tssr4318	transcription start site region 4318	571 bp upstream
Tssr4319	transcription start site region 4319	514 bp upstream
Tssr4320	transcription start site region 4320	450 bp downstream
Tssr4321	transcription start site region 4321	422 bp upstream
Tssr4322	transcription start site region 4322	323 bp downstream
Tssr4323	transcription start site region 4323	288 bp upstream
Tssr4324	transcription start site region 4324	258 bp downstream
Tssr4325	transcription start site region 4325	207 bp downstream
Tssr4326	transcription start site region 4326	169 bp upstream
Tssr4327	transcription start site region 4327	166 bp downstream
Tssr4328	transcription start site region 4328	84 bp downstream
Tssr4329	transcription start site region 4329	86 bp upstream
Tssr4330	transcription start site region 4330	17 bp upstream
Tssr4331	transcription start site region 4331	41 bp downstream
Tssr4332	transcription start site region 4332	147 bp downstream
Tssr4333	transcription start site region 4333	159 bp upstream
Tssr4334	transcription start site region 4334	181 bp downstream
Tssr4335	transcription start site region 4335	328 bp downstream
Tssr4336	transcription start site region 4336	332 bp upstream
Tssr4337	transcription start site region 4337	405 bp downstream