rs30671211 SNP Detail

Summary

• ID
  rs30671211
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AATATGGCGA GGAAAACTGA AAAAGGCGTG AAATTTAGAA ATATCCACTG TAGGACATGG
  AATATGGCAA GAAAACTGAA AATCATGGAA AATGAGAAAC ATCCACTTGA CGACTTGAAA
  AATGACGAAG TCACTGAAAA ACGTGAAAAA TGTGAAAGGC ACACTGGAGG ACCTGGAATA
  TGGCGAGAAA ACTGAAAATC ACAGAAAATG AGAAACATCC ACTTGACGAC TTGAAAAATG
  ACGAAATCAC TGAAAAACGT GAAAAAAGAG AAATGCACAC TGTTGGACCT GGAATATGGC
  D
  AGAAAACCGA AAATCACGGA AAATGAGAAA TACACACTTT AGGACATGAA ATATGGCGAG
  GAAAACTGAA AAAGGTGGAA AATTTAGAAA TGTCCACTGT AGGAAATGGA ATATGGCAAG
  AAAACTGAAA ATCACGGAAA ATGAGAAACA TCCACTTGAC TACTTGAAAA ATGACGAAAT
  CAATGAAAAA CGTGAAAAAT GAGAAATGCA CAGTGTAGGA CATAGAACAT GGTGAGAAAA
  CTGAAAATCA CGGAAAATGA GAAATACACA CTTTAAGACG TGAAATATGG CGAGGAAAAC
                                                                   
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46430184	mCV25368617	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	G	G
ss46469688	mCV24743917	ABI	CRAMUS_MOUSE	r	SNP	T				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30671211					SNP	?	T	G	G	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050574 () rs orientation: forward

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1752 bp downstream
Tssr4285	transcription start site region 4285	1727 bp upstream
Tssr4286	transcription start site region 4286	1623 bp downstream
Tssr4287	transcription start site region 4287	1588 bp upstream
Tssr4288	transcription start site region 4288	1560 bp downstream
Tssr4289	transcription start site region 4289	1465 bp upstream
Tssr4290	transcription start site region 4290	1458 bp downstream
Tssr4291	transcription start site region 4291	1378 bp upstream
Tssr4292	transcription start site region 4292	1342 bp downstream
Tssr4293	transcription start site region 4293	1307 bp upstream
Tssr4294	transcription start site region 4294	1305 bp downstream
Tssr4295	transcription start site region 4295	1232 bp upstream
Tssr4296	transcription start site region 4296	1269 bp downstream
Tssr4297	transcription start site region 4297	1205 bp upstream
Tssr4298	transcription start site region 4298	1187 bp downstream
Tssr4299	transcription start site region 4299	1147 bp downstream
Tssr4300	transcription start site region 4300	1109 bp downstream
Tssr4301	transcription start site region 4301	1091 bp upstream
Tssr4302	transcription start site region 4302	1079 bp upstream
Tssr4303	transcription start site region 4303	1024 bp downstream
Tssr4304	transcription start site region 4304	995 bp upstream
Tssr4305	transcription start site region 4305	926 bp downstream
Tssr4306	transcription start site region 4306	907 bp upstream
Tssr4307	transcription start site region 4307	886 bp downstream
Tssr4308	transcription start site region 4308	854 bp upstream
Tssr4309	transcription start site region 4309	810 bp upstream
Tssr4310	transcription start site region 4310	763 bp downstream
Tssr4311	transcription start site region 4311	735 bp upstream
Tssr4312	transcription start site region 4312	655 bp downstream
Tssr4313	transcription start site region 4313	596 bp upstream
Tssr4314	transcription start site region 4314	584 bp downstream
Tssr4315	transcription start site region 4315	560 bp downstream
Tssr4316	transcription start site region 4316	533 bp upstream
Tssr4317	transcription start site region 4317	457 bp downstream
Tssr4318	transcription start site region 4318	433 bp upstream
Tssr4319	transcription start site region 4319	376 bp upstream
Tssr4320	transcription start site region 4320	312 bp downstream
Tssr4321	transcription start site region 4321	284 bp upstream
Tssr4322	transcription start site region 4322	185 bp downstream
Tssr4323	transcription start site region 4323	150 bp upstream
Tssr4324	transcription start site region 4324	120 bp downstream
Tssr4325	transcription start site region 4325	69 bp downstream
Tssr4326	transcription start site region 4326	31 bp upstream
Tssr4327	transcription start site region 4327	28 bp downstream
Tssr4328	transcription start site region 4328	within coordinates
Tssr4329	transcription start site region 4329	20 bp downstream
Tssr4330	transcription start site region 4330	155 bp upstream
Tssr4331	transcription start site region 4331	179 bp downstream
Tssr4332	transcription start site region 4332	285 bp downstream
Tssr4333	transcription start site region 4333	297 bp upstream
Tssr4334	transcription start site region 4334	319 bp downstream
Tssr4335	transcription start site region 4335	466 bp downstream
Tssr4336	transcription start site region 4336	470 bp upstream
Tssr4337	transcription start site region 4337	543 bp downstream