rs30671741 SNP Detail

Summary

• ID
  rs30671741
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050483 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  CTAAAGTGTG TATTTCTCAT TTTCCGTGAT TTTCAGTTTT CTCGCCATAT TCCAGGTCCG
  TCAGTGTACA ATTCTCATTT TTCACGTTTT TCAGTATTTC CGTCATTTTT CAAGTCGTCA
  AGTGGATGTT TCTCATTTTC ATGATTTTCA GTTTTCTTGC CATATTCCAC GTCCTACAGT
  GGACATTTCT AAATTTTCCA CCTTTTTCAG TTTTACTCAA CATATTTCTG GTCCTAAAAT
  GTGTATTTCT CATTTTCCGT GATTTTCAGT TTTCTCGCCA TATACCAGGT CCTTCAGTGT
  R
  CATTATTCAT TTTTCACGTT TTTCAGTCAT TTCGTCATTT TTCAGGTCGT CAAGTGGATG
  TTTCTCATTT TCCATTATTT TCAGTTTTCT CGCCATATTC CAGGTCATTC AAAGTGCATT
  TCTCATTTTT CACGTTTTTC AGTGATTTCG TCATTTTTCA TGTCTTCAAG TGGATGTTTC
  TCATTTTCCA TGATTTTCAG TTTTCTCGCC ATATTCCAGG TCCTTCCGTG TGTATTTATC
  ATTTTTCACG TTTTTCAGTG ATTTCGTCAT TTTTCATGTC GTCAAGTGGA TGTTTCTCAT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46431163	mCV22881485	ABI	CRAMUS_MOUSE	f	SNP	A	G		G
ss46442580	mCV25367010	ABI	CRAMUS_MOUSE	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30671741					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050483 () rs orientation: reverse

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1843 bp downstream
Tssr4285	transcription start site region 4285	1818 bp upstream
Tssr4286	transcription start site region 4286	1714 bp downstream
Tssr4287	transcription start site region 4287	1679 bp upstream
Tssr4288	transcription start site region 4288	1651 bp downstream
Tssr4289	transcription start site region 4289	1556 bp upstream
Tssr4290	transcription start site region 4290	1549 bp downstream
Tssr4291	transcription start site region 4291	1469 bp upstream
Tssr4292	transcription start site region 4292	1433 bp downstream
Tssr4293	transcription start site region 4293	1398 bp upstream
Tssr4294	transcription start site region 4294	1396 bp downstream
Tssr4295	transcription start site region 4295	1323 bp upstream
Tssr4296	transcription start site region 4296	1360 bp downstream
Tssr4297	transcription start site region 4297	1296 bp upstream
Tssr4298	transcription start site region 4298	1278 bp downstream
Tssr4299	transcription start site region 4299	1238 bp downstream
Tssr4300	transcription start site region 4300	1200 bp downstream
Tssr4301	transcription start site region 4301	1182 bp upstream
Tssr4302	transcription start site region 4302	1170 bp upstream
Tssr4303	transcription start site region 4303	1115 bp downstream
Tssr4304	transcription start site region 4304	1086 bp upstream
Tssr4305	transcription start site region 4305	1017 bp downstream
Tssr4306	transcription start site region 4306	998 bp upstream
Tssr4307	transcription start site region 4307	977 bp downstream
Tssr4308	transcription start site region 4308	945 bp upstream
Tssr4309	transcription start site region 4309	901 bp upstream
Tssr4310	transcription start site region 4310	854 bp downstream
Tssr4311	transcription start site region 4311	826 bp upstream
Tssr4312	transcription start site region 4312	746 bp downstream
Tssr4313	transcription start site region 4313	687 bp upstream
Tssr4314	transcription start site region 4314	675 bp downstream
Tssr4315	transcription start site region 4315	651 bp downstream
Tssr4316	transcription start site region 4316	624 bp upstream
Tssr4317	transcription start site region 4317	548 bp downstream
Tssr4318	transcription start site region 4318	524 bp upstream
Tssr4319	transcription start site region 4319	467 bp upstream
Tssr4320	transcription start site region 4320	403 bp downstream
Tssr4321	transcription start site region 4321	375 bp upstream
Tssr4322	transcription start site region 4322	276 bp downstream
Tssr4323	transcription start site region 4323	241 bp upstream
Tssr4324	transcription start site region 4324	211 bp downstream
Tssr4325	transcription start site region 4325	160 bp downstream
Tssr4326	transcription start site region 4326	122 bp upstream
Tssr4327	transcription start site region 4327	119 bp downstream
Tssr4328	transcription start site region 4328	37 bp downstream
Tssr4329	transcription start site region 4329	39 bp upstream
Tssr4330	transcription start site region 4330	64 bp upstream
Tssr4331	transcription start site region 4331	88 bp downstream
Tssr4332	transcription start site region 4332	194 bp downstream
Tssr4333	transcription start site region 4333	206 bp upstream
Tssr4334	transcription start site region 4334	228 bp downstream
Tssr4335	transcription start site region 4335	375 bp downstream
Tssr4336	transcription start site region 4336	379 bp upstream
Tssr4337	transcription start site region 4337	452 bp downstream