rs30672274 SNP Detail

Summary

• ID
  rs30672274
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:107966531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCGTCCATT TCCTTAAAGA
  AGCCTAGATC TTCTAGAGGG AGATTCAGTC GCCCCAATCG GGACACTAGG AAGTGCCATT
  GGTAAAATAT TTCTTTCATA AAATTTTTAT TTTGTATTTT TGGCACCTTT TCTGAGGAGT
  CATAAATATA TAGAAGAGGC TTCTGAACTA ATTTAAACAG TTCCACTTCT TCATACAATG
  R
  TTTATCTTCC GGCTACTTAA TAAACTACAC TACGTCAATG GAGAGATTTT TCAGGCTTTT
  AGAAAAAAAT ATATTTATAG TTGCATCTCC AGAACCCACT GAAGTAGGCG TTCTCACATT
  TCCTTAAAAG TGAATAAAAG TTATTGGGAT GTCCAGAAAA CTACTGATAT CTCCTAGCTC
  TCTACTGAGA ATTACAACCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47970685	NES12007955	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30672274					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47970685	NES12007955	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:107966531 () rs orientation: forward

Symbol	Name	Function Class
Gm67918	predicted gene, 67918	392 bp upstream
Tssr95651	transcription start site region 95651	417 bp upstream