rs30673134 SNP Detail

Summary

• ID
  rs30673134
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:107968161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACATAAAC GTACACAGTT
  GATTTGTACA GAACTGAACT GAGTACCGAC ATCAGAAGAT AAACTTTCCT AGCAATTATA
  ATCTGGAAGG GGTGAATAAA TGTTTTTTTT TTTTTTCATG GAACCACCAT TGAAGTCTGA
  CTTACAAAAA CTCGTGTGCC CGGTGTCACT ACAAGTGATA AGCTAAAAAA GCAAACACCA
  Y
  GTATTATGGA CTGCTGGGAT CATGTTTATG GGAAGATAAG ATTACAGATC AAAGTTGATA
  CTTTTTCCTG TATGTATGTC TCCTCCTGAG ATAGCCATCA TATTTCTGTC AGGCTGTCTA
  TTTCTTGTGT CATTCAGAGG CAAACAGGAC AAATGATTTT TTAAAATGGG TTAACAATAG
  AAGTGAAGGT AAATATTCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47970695	NES12007813	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30673134					SNP	T	T	T	T	T	T	C	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47970695	NES12007813	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:107968161 () rs orientation: forward

Symbol	Name	Function Class
Gm67918	predicted gene, 67918	823 bp downstream
Rr438625	regulatory region 438625	782 bp proximal
Tssr95651	transcription start site region 95651	1188 bp downstream