rs30673690 SNP Detail

Summary

• ID
  rs30673690
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70347852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACAAGGCTG AGGCAAGAGG
  ATTGCTGTGA ATTTAATGTC AGCTTGTATT ATAGAATGAG TTACAGGCTA ATGAAAGCCA
  CAGAGTAAGA CCCTATCTTT AAACAACAAC AACAAAACAA CAAAAACCCA CATAAACATA
  CACCAAAAAA AAAAAAAAGA TTGTATAGTT CATGTTCACG TGTGTGTTTT TTGACAGTGC
  Y
  AGGACAACCT CAGCTGCTGT CCCCAGGAGC TATGTACCTT GTGTGCCTTG CTTTTAAGGT
  AGGATCTCAC CAGCCTGGGA CTCCAAGTAG GCTAAGCTGG GAGACTAGCA AGCCATGGGG
  ATCTGCCTGT CTCCAGCTCT GGGATCATAA ATTATAAGTA TGTGCCAGCA CACCTAGCTT
  TATAAAAAAG ATCAAGTTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39210038	mCV24339237	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	T
ss139680839	ENSMUSSNP198076	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30673690					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70347852 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494843	regulatory region 494843			700 bp distal
Rr494844	regulatory region 494844			568 bp proximal
Rr494845	regulatory region 494845			662 bp proximal