rs30679471 SNP Detail

Summary

• ID
  rs30679471
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:104308436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA GGAAGACAGA GGACAGGAGG
  R
  CAGAAGGTCA AGAGGGCAGG ATGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46433369	mCV22903396	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss138019020	ENSMUSSNP4576095	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30679471					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:104308436 () rs orientation: forward

Symbol	Name	Function Class
Serpina3k	serine (or cysteine) peptidase inhibitor, clade A, member 3K	Intron
Tssr114848	transcription start site region 114848	1689 bp downstream
Tssr114849	transcription start site region 114849	1656 bp downstream
Tssr114850	transcription start site region 114850	1612 bp downstream
Tssr114851	transcription start site region 114851	1539 bp downstream
Tssr114852	transcription start site region 114852	1507 bp downstream
Tssr114853	transcription start site region 114853	1307 bp downstream
Tssr114854	transcription start site region 114854	1137 bp downstream
Tssr114855	transcription start site region 114855	887 bp upstream
Tssr114856	transcription start site region 114856	1943 bp upstream
Tssr114857	transcription start site region 114857	1955 bp upstream
Tssr117574	transcription start site region 117574	1268 bp upstream
Tssr117575	transcription start site region 117575	923 bp downstream