rs30681648 SNP Detail

Summary

• ID
  rs30681648
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:11186235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTCT CTTCGGGCCT TCATCCTCAC
  Y
  CAGGAGGCAG AGCTGATCCT CAGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39210397	mCV25174398	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss139024345	ENSMUSSNP1626534	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30681648					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:11186235 () rs orientation: forward

Symbol	Name	Function Class
Gapdhrt	glyceraldehyde-3-phosphate dehydrogenase, retrotransposed	1587 bp upstream
Mir5124b	microRNA 5124b	977 bp downstream