rs30682501 SNP Detail

Summary

• ID
  rs30682501
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:21788938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGTCTTGCCT CACTATCAAA CACATTGCCT ATATGTTAAG AACAAGTACC ACTTTGGGTT
  TCAGGTATAC AGAGTTCTAA AATGATATTT TTTAGGAAGC TACAGTATCC TTAAAAATTG
  TTGAAGTTTT TATGAACCAG GCCTGAATCA TGCCTCTGGC TTCTAAACCG TGGGTTATTT
  TTGGCTATGT GGAGACAACT TTTATCAATA TTAGAAAAAG TTAGTCAGAG ACAGAATGGG
  TAGGATGAAA AGAAGGGCAT CCCACATGAT AACCTGCATG TAATCTGCAG TGTCTACAGT
  R
  GTATAGGACA AAATACAGTT TTGATAGAGA AAGTGTGCAT GTCTAATGAC TGCAGTGTGC
  TCTACAAGGT ACACTCAAGT GACTTACCCT ACAGCTTTCA AGGGCCTAAT GCAGCTTGGC
  AGAGATATCC AAGATAAATA AAGATGTTGG TAGGCAGTCT TGAAGCAGGG ATTCCAGTGA
  CGTTACATGG TATGAAGAGT CTGGCTATAA ATCATCACAC ATTCCTTCAG GGAAAACCAT
  GTCCTGATGA AAGGACAACA GTGCTGGTGA CCTCTAGATT GCAGGTTCTA GTAGCACAGA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46434392	mCV24381205	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30682501					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:21788938 () rs orientation: forward

Symbol	Name	Function Class
Defa5	defensin, alpha, 5	547 bp downstream
Gm65300	predicted gene, 65300	within coordinates