rs30686234 SNP Detail

Summary

• ID
  rs30686234
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:7282532 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              GATGGATTTT TTTCAAAGAA
  AATTTCACAT CCTGTCTGTA GAAAAATTCA CTTTGCTAAG AGAACACGAA ATGCTAGACT
  GTTATTAAAT GTCTAATAAA AGAGTGAAAG GTTAAGTTGC TGTGAATGTT CATAGGGTAC
  AGTATCAAAG GAGCCCTATT TACATCCTAG TCTCTGTAAA CAATGCTCCC TTGGTTTGTA
  S
  AGTTCGGATA ACCCTATAAG AACAACTCTG GGAACTGTGT CCCTGATGCA GTAGGTAAAG
  TGCTTGCTGT GCAATTGTGA GTTGGTATCT CCAACACTGT CATAAAAGCT GTGTGTGGTA
  TTGCATATCT GCAACACCTG CACTAGGAGG TACATGGATC AGAAAATAAG AGTGTTGCTT
  GAAGCTCATT GGCTCTAGTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46434532	mCV23566859	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30686234					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:7282532 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi18306	CpG island 18306	980 bp distal
Gm45844	predicted gene 45844	1244 bp upstream
Tssr64464	transcription start site region 64464	1533 bp downstream
Tssr70610	transcription start site region 70610	1488 bp upstream
Tssr70611	transcription start site region 70611	1447 bp upstream