rs30687865 SNP Detail

Summary

• ID
  rs30687865
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71658713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATCCTTCC AGAAGGACCT
  GCTGGAGATG TTGAGTTCTT CCTAACTCCC CCAGCGTCCT CTTCCAAATG CAGTTGTTTC
  CAGGGACCTT ATACACCAGC TCTCCCCAGA GGACACACCC ATCCTAAGCC ACAGCCCCTA
  CTTGTCCCTT TCTCTGAGCT GCTGAGTTCT TTACTCCCAT TGGCAATGTG GATCTCTAAC
  R
  GAGAGATTAG GATGGTGACA TAACCCCTTA GTAGAGTACA AAGCTGTGTT TCAGTTCCTA
  GAACCCATAG GTGTGGTTCC AGCAGTCAAG ACGTAGAGGC AGGATGGGAT GATCAGCTAA
  GGTCATCCTT GTCTACCCTG TGAATTTGAG GCCACTCTGG GCGTGGTTTG TTTCCCCCAG
  GAAGTCTACT TGAGAGAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47971906	NES11920117	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30687865					SNP	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47971906	NES11920117	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71658713 () rs orientation: forward

Symbol	Name	Function Class
Rpl19-ps9	ribosomal protein L19, pseudogene 9	1569 bp upstream
Tssr57037	transcription start site region 57037	1539 bp upstream