CTGGAGATGT TGAGTTCTTC CTAACTCCCC CAGCGTCCTC TTCCAAATGC AGTTGTTTCC AGGGACCTTA TACACCAGCT CTCCCCAGAG GACACACCCA TCCTAAGCCA CAGCCCCTAC TTGTCCCTTT CTCTGAGCTG CTGAGTTCTT TACTCCCATT GGCAATGTGG ATCTCTAACG GAGAGATTAG GATGGTGACA W AACCCCTTAG TAGAGTACAA AGCTGTGTTT CAGTTCCTAG AACCCATAGG TGTGGTTCCA GCAGTCAAGA CGTAGAGGCA GGATGGGATG ATCAGCTAAG GTCATCCTTG TCTACCCTGT GAATTTGAGG CCACTCTGGG CGTGGTTTGT TTCCCCCAGG AAGTCTACTT GAGAGAAAAC TAATTTTTCC CTCGCAATGG W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss47971908 | NES11920120 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | A | T | T | T | T | T | A | T | A | T | T |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
||||
rs30687867 | SNP | T | T | A | T | T | T | T | T | A | T | A | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss47971908 | NES11920120 | PERLEGEN | MM_PANEL | f | SNP | A/T |
Location: Chr6:71658734 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rpl19-ps9 | ribosomal protein L19, pseudogene 9 | 1548 bp upstream | ||||||
Tssr57037 | transcription start site region 57037 | 1518 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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