rs30691067 SNP Detail

Summary

• ID
  rs30691067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:116406174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTAAATGGAG TAATAGTGTT ATCAGGCTTA CACAGAATGA
  ATTTGAACAG ATTATGTACC CAGTGGGAGG TAATTGGAAA AAACAACAAA CAAAGGAATA
  Y
  AATTACTACT GAGTATCAGA AATCTCTTGA GGTTATCAAA TGATATTGAG AGATGGGAGG
  TTGGAGTTGT CCTTTTTGGG TTTTCACTTA GGTTTTAAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46434888	mCV22526933	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss138871278	ENSMUSSNP4350998	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30691067					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:116406174 () rs orientation: forward

Symbol	Name	Function Class
Ncapg2	non-SMC condensin II complex, subunit G2	within coordinates
Tg(Camk2a-tTA)1Mmay	transgene insertion 1, Mark Mayford	within coordinates
Tssr115524	transcription start site region 115524	395 bp upstream