rs30691068 SNP Detail

Summary

• ID
  rs30691068
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050441 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  ATTTTCCAAC TTTTTCAGTT TTCCTCGCCA TATTTCACGT CCTAAAGTGT GTATTTCTAA
  TTATCCATGA TTTTCATTTT TCTTGCCATA TTCCAGGTCC TACAGTGTGC ATTTCTCATT
  TTTCACATTT TTCAGTGAAT TTGTCATTTT TCAAGTCTTC GAGTGGATGT TTTTCATTTT
  CCATGATTTT CAGTTTTCTT ACCATATCCG ACGTCCTAAT GTGGACATTT CTAAATTTTC
  CAGCTTTTTC AGTTTTCCTC GCCATATTTC ACGTGCTAAA GTGTGTATTT CTCTTTCCCC
  D
  TGATTTTCAG TTTTCTCGCC CCATTCCAGG TCCTTCAGTG TGCATTTCTC ATTTTTCACG
  TTTTTCAGTG ATTTCGTCAT TTTTCAATTT GTCAAGTGGA TGTTTCTCAT TTTCCATGAT
  TTTCAGTTTT CTTGTCAATT TCCACGTCCT ACAGTGGACA TTTCTAAATT TTTCAACTTT
  TTCAGTTTTC CTAGCCATAT TTTATGACCT AAAGTGTGTA TTTCTCATTT TCCGTGATTT
  TCAGTTTTCT CGCCATATTC CAGGTCCTTC AGTGTGCATT TCTCATTTTT CACGTTGTTC
                                                                   
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss46434889	mCV23580447	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss46451177	mCV25360765	ABI	CRAMUS_MOUSE	r	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30691068					SNP	?	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050441 () rs orientation: reverse

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1885 bp downstream
Tssr4285	transcription start site region 4285	1860 bp upstream
Tssr4286	transcription start site region 4286	1756 bp downstream
Tssr4287	transcription start site region 4287	1721 bp upstream
Tssr4288	transcription start site region 4288	1693 bp downstream
Tssr4289	transcription start site region 4289	1598 bp upstream
Tssr4290	transcription start site region 4290	1591 bp downstream
Tssr4291	transcription start site region 4291	1511 bp upstream
Tssr4292	transcription start site region 4292	1475 bp downstream
Tssr4293	transcription start site region 4293	1440 bp upstream
Tssr4294	transcription start site region 4294	1438 bp downstream
Tssr4295	transcription start site region 4295	1365 bp upstream
Tssr4296	transcription start site region 4296	1402 bp downstream
Tssr4297	transcription start site region 4297	1338 bp upstream
Tssr4298	transcription start site region 4298	1320 bp downstream
Tssr4299	transcription start site region 4299	1280 bp downstream
Tssr4300	transcription start site region 4300	1242 bp downstream
Tssr4301	transcription start site region 4301	1224 bp upstream
Tssr4302	transcription start site region 4302	1212 bp upstream
Tssr4303	transcription start site region 4303	1157 bp downstream
Tssr4304	transcription start site region 4304	1128 bp upstream
Tssr4305	transcription start site region 4305	1059 bp downstream
Tssr4306	transcription start site region 4306	1040 bp upstream
Tssr4307	transcription start site region 4307	1019 bp downstream
Tssr4308	transcription start site region 4308	987 bp upstream
Tssr4309	transcription start site region 4309	943 bp upstream
Tssr4310	transcription start site region 4310	896 bp downstream
Tssr4311	transcription start site region 4311	868 bp upstream
Tssr4312	transcription start site region 4312	788 bp downstream
Tssr4313	transcription start site region 4313	729 bp upstream
Tssr4314	transcription start site region 4314	717 bp downstream
Tssr4315	transcription start site region 4315	693 bp downstream
Tssr4316	transcription start site region 4316	666 bp upstream
Tssr4317	transcription start site region 4317	590 bp downstream
Tssr4318	transcription start site region 4318	566 bp upstream
Tssr4319	transcription start site region 4319	509 bp upstream
Tssr4320	transcription start site region 4320	445 bp downstream
Tssr4321	transcription start site region 4321	417 bp upstream
Tssr4322	transcription start site region 4322	318 bp downstream
Tssr4323	transcription start site region 4323	283 bp upstream
Tssr4324	transcription start site region 4324	253 bp downstream
Tssr4325	transcription start site region 4325	202 bp downstream
Tssr4326	transcription start site region 4326	164 bp upstream
Tssr4327	transcription start site region 4327	161 bp downstream
Tssr4328	transcription start site region 4328	79 bp downstream
Tssr4329	transcription start site region 4329	81 bp upstream
Tssr4330	transcription start site region 4330	22 bp upstream
Tssr4331	transcription start site region 4331	46 bp downstream
Tssr4332	transcription start site region 4332	152 bp downstream
Tssr4333	transcription start site region 4333	164 bp upstream
Tssr4334	transcription start site region 4334	186 bp downstream
Tssr4335	transcription start site region 4335	333 bp downstream
Tssr4336	transcription start site region 4336	337 bp upstream
Tssr4337	transcription start site region 4337	410 bp downstream