rs30693839 SNP Detail

Summary

• ID
  rs30693839
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20986739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACTGCCTTTG GTGATGAACG GCAATGTGGA AAGTGTAAGC TGAATAAACC CTTTCCTCCC
  AGAATTGCTT TTTGGCCCTA GTATTCCATT GCAGCAATAG AAACCCTAAC TAAGAAAGGA
  GCGAAAGAGT AAAAGTCCAG TGAATTCAGC AGACACTCTG GGTTCTCACT GGAGAGGAAA
  AAGAATTTAA TCCCATGTAA CACAGTATTT ATCTCTAAGA AATCACAGCC TCATGTGGGT
  GTAGAAGAAA CACCCAGATA AGTACAGAAC AAGACTGTGT CTGAATGGGA CATCAAACTA
  R
  AAGAAATGCA GGCTATTTGC TGAGGCTCGA GGTGTTGCTT TGGCTTCATG CTTTGGAGAA
  CATGGCGAGC TAGCGTCAGA GAGGTGCCTT CAGAGATGGA TAAAATTCAC AAATATGGAG
  AAAGTCACAC CCAGTAAAGA GATTGGCTTA GACGAAGACC CCAAAAAGGA AGCCCCAGTT
  GAGCATCTAC TTAAAAGATG TGACCACTCA GATTTGTTTG TCAAAATAAA AATCTAGAAA
  CAAACCGTTT ATTCACAAGA CGGTGGTCAA AGGAATTGTG GTATACTTAG CCAATGAGAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss44954295	mCV24135301	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss148726339	ENSMUSSNP3208311	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs30693839					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20986739 () rs orientation: forward

Symbol	Name	Function Class
Gm24171	predicted gene, 24171	975 bp upstream
Paqr8	progestin and adipoQ receptor family member VIII	within coordinates
Tssr6058	transcription start site region 6058	1325 bp upstream
Tssr6059	transcription start site region 6059	1341 bp upstream