rs30696950 SNP Detail

Summary

• ID
  rs30696950
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:20704741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAA CAAGAATAAG AGAACACCAC
  W
  GACAGTAGCC AAGGGAGAAA TTACA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39249180	mCV23218611	ABI	CRAMUS_MOUSE	f	SNP	T	A					A
ss49162292	NES12531609	PERLEGEN	MM_PANEL2	f	SNP	T	A	A	A	T	A		A	T		A	T	A	A		A
ss139195081	ENSMUSSNP1658876	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss324564658	CHEV_14_21473895	CHEVERUD	SCREENING_POP	f	SNP										A					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30696950					SNP	T	A	A	A	T	A	A	A	T	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49162292	NES12531609	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:20704741 () rs orientation: forward

Symbol	Name	Function Class
Myoz1	myozenin 1	Intron
Rr488338	regulatory region 488338	1857 bp proximal
Tssr124385	transcription start site region 124385	568 bp upstream
Tssr127644	transcription start site region 127644	1815 bp downstream