rs30696955 SNP Detail

Summary

• ID
  rs30696955
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161345763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agtctaaac caaaacatat ttgtctcaat
  gtgcttccta gatggtcatt tctgctgtaa actcatgtgg taaaagtggt aaggtacttg
  tttgggcctt ttctTGAGAC ATATAGTTTT GAAATTAAAA TATAATTATA GAATCTTCCT
  Y
  CATTCCTTTT GTCCCCCAAG CCCATCTACC TTCTCAACCC ACGCCCTTTT TCCCAATTTC
  ATGGCTTTTA GTTTTTTCTT TAGTTGTTAA Taatacaacc tgcttagtcc atatgttact
  tgtatgtata tggatttaga gctgaccact                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44954590	mCV24543273	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss145915606	ENSMUSSNP154630	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss320080970	CHEV_1_163448325	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30696955					SNP	T	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161345763 () rs orientation: forward

Symbol	Name	Function Class
Gm31815	predicted gene, 31815	within coordinates
Rr421813	regulatory region 421813	503 bp distal