rs30698940 SNP Detail

Summary

• ID
  rs30698940
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55205789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGACC TGATTCAACC TTGCATTCCC
  R
  TTTGCAGCCA CCTATGCCAA ATGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39211880	mCV23144791	ABI	CRAMUS_MOUSE	f	SNP		A					G		A
ss52723015	NES15567938	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A		A	A	A	A		G	A	A	A		A
ss139574348	ENSMUSSNP277824	ENSEMBL	ENSEMBL_Sanger	f	SNP		A							A
ss324641231	CHEV_14_55587169	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30698940					SNP	A	A	A	A	A	A	G	A	A	A	A	A	G	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723015	NES15567938	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55205789 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	426 bp upstream
Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	1405 bp upstream
Rr407057	regulatory region 407057	549 bp distal
Rr492378	regulatory region 492378	1738 bp distal
Rr492379	regulatory region 492379	1201 bp distal
Rr492380	regulatory region 492380	within coordinates
Rr492381	regulatory region 492381	1329 bp proximal
Tssr4420	transcription start site region 4420	1917 bp upstream
Tssr4421	transcription start site region 4421	1911 bp upstream
Tssr4422	transcription start site region 4422	1859 bp upstream
Tssr4423	transcription start site region 4423	1833 bp upstream
Tssr4424	transcription start site region 4424	1795 bp upstream
Tssr4425	transcription start site region 4425	1682 bp upstream
Tssr125718	transcription start site region 125718	340 bp upstream
Tssr125719	transcription start site region 125719	419 bp upstream
Tssr125720	transcription start site region 125720	449 bp upstream
Tssr125721	transcription start site region 125721	469 bp upstream
Tssr125722	transcription start site region 125722	894 bp upstream
Tssr125723	transcription start site region 125723	963 bp upstream
Tssr125724	transcription start site region 125724	975 bp upstream
Tssr125725	transcription start site region 125725	1835 bp upstream
Tssr125726	transcription start site region 125726	1860 bp upstream
Tssr125727	transcription start site region 125727	1893 bp upstream
Tssr128742	transcription start site region 128742	1747 bp upstream
Tssr128743	transcription start site region 128743	1724 bp upstream
Tssr128744	transcription start site region 128744	1395 bp upstream
Tssr128745	transcription start site region 128745	1110 bp upstream
Tssr128746	transcription start site region 128746	357 bp upstream
Tssr128747	transcription start site region 128747	333 bp upstream
Tssr128748	transcription start site region 128748	289 bp upstream
Tssr128749	transcription start site region 128749	258 bp upstream
Tssr128750	transcription start site region 128750	236 bp upstream
Tssr128751	transcription start site region 128751	230 bp upstream
Tssr128752	transcription start site region 128752	171 bp upstream
Tssr128753	transcription start site region 128753	9 bp downstream
Tssr128754	transcription start site region 128754	88 bp downstream