rs30702034 SNP Detail

Summary

• ID
  rs30702034
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131313784 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTATGGGTC AAGCAGGCAT TGAGCAGCAC CAGGAAGCAG
  TTGCTTCAAG AGCATTCACC CTGTACTGCT CTCACCGTCT GGGGGTGGGA TGAAGTGAGA
  Y
  GATGTGTTCG GAAAGGCCAA GCTGTGTTCT CTGCAGATTT GCACTCACAG CTGCTCCAGG
  ATTTCCTCAC AAGCGCACTA CACGGGTGTC GGTAAACGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45456906	mCV23191340	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss135904932	ENSMUSSNP6838847	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30702034					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131313784 () rs orientation: forward

Symbol	Name	Function Class
Papss1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	within coordinates
Rr74408	regulatory region 74408	122 bp proximal
Rr74409	regulatory region 74409	1270 bp proximal