rs30702326 SNP Detail

Summary

• ID
  rs30702326
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:56960042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTT GGCCTTTGGT GACAATAAGA
  W
  GGAAAATGAA TCTTAAGGGC ATCTC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss45539334	mCV22832052	ABI	CRAMUS_MOUSE	f	SNP						T	A
ss46975418	NES10787130	PERLEGEN	MM_PANEL2	f	SNP	T	A	T	T	T		A	A	T		T		A
ss135197499	ENSMUSSNP1771403	ENSEMBL	ENSEMBL_Sanger	f	SNP							A
ss320779020	CHEV_3_56856543	CHEVERUD	SCREENING_POP	f	SNP										T		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs30702326					SNP	T	A	T	T	T	T	A	A	T	T	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46975418	NES10787130	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:56960042 () rs orientation: forward

Symbol	Name	Function Class
Gm22269	predicted gene, 22269	1529 bp upstream