rs30703760 SNP Detail

Summary

• ID
  rs30703760
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181339257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCATA ACGAGGAGGG TAGAGAAAAC
  W
  GACCTGCTTG ACTTTTAGAG TTTGT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44955025	mCV25243991	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	T
ss146396649	ENSMUSSNP3436736	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			T
ss320161701	CHEV_1_183441823	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30703760					SNP	A	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181339257 () rs orientation: forward

Symbol	Name	Function Class
Ccdc121rt1	coiled-coil domain containing 121, retrogene 1	241 bp upstream
Cpgi1136	CpG island 1136	828 bp distal
Rr424762	regulatory region 424762	98 bp distal
Rr424763	regulatory region 424763	187 bp distal
Rr424764	regulatory region 424764	749 bp proximal