rs30704809 SNP Detail

Summary

• ID
  rs30704809
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:39908543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGG AGGCCTGGGA TTAGATTTCT
  R
  TTTCTTTGCC CTGATTTATG TGAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	CAST/EiJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss47475394	NES11466147	PERLEGEN	MM_PANEL2	f	SNP			A		A	A		G
ss144611600	ENSMUSSNP2789759	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322623111	CHEV_8_40540856	CHEVERUD	SCREENING_POP	f	SNP				G			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	CAST/EiJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs30704809					SNP	G	G	A	G	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47475394	NES11466147	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:39908543 () rs orientation: forward

Symbol	Name	Function Class
Gm5609	predicted gene 5609	408 bp upstream
Rr1558	regulatory region 1558	within coordinates