rs30707137 SNP Detail

Summary

• ID
  rs30707137
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:54868874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCCCACCCC CCCAATCCCT TTCCCTTCTG GGGCCTGAGA
  AGCACACAAG ACAATGCCCA GAGCTGGGAT GCCCAGGGCA GGCTGACAGC TGGGCAGAGA
  M
  GGCCGTGGGG CTGAAGCTCT TCCCTAGGAG GTGGGCTGGC TCCCTCCTTC CTTCTACTAG
  AAGCCGATGA AGCCAGGATG AGGCCATGAG TGATGGATG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39213210	mCV23591148	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A
ss139566974	ENSMUSSNP6335432	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		A
ss324638704	CHEV_14_55250254	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30707137					SNP	C	C	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:54868874 () rs orientation: forward

Symbol	Name	Function Class
Cdh24	cadherin-like 24	within coordinates
Cpgi6468	CpG island 6468	652 bp proximal
Psmb11	proteasome (prosome, macropain) subunit, beta type, 11	1861 bp downstream
Tssr128611	transcription start site region 128611	867 bp downstream
Tssr128612	transcription start site region 128612	886 bp downstream