rs30713272 SNP Detail

Summary

• ID
  rs30713272
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:151027490 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGATGAGA GCTCTGGCCA TTCATCAAAG
  TAACTAATGT ATCAGAGAAG GGAAACATCA ATATTCAGCC TTTTAGATTT TTACTAAAAA
  TACCTGTCCA TTCTTAATTC CTCGAGACTC ATCCAGGGAT ACACAATGTA TTTATTTTTT
  Y
  TCTctctctc tctctttctg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tCGGAGGTCA
  AGGGGTGACT ATGGTTTtgt gtgtgtgtgt gtgcctatgt gtgtgtgtgt gtgtgtgtgt
  gtgtgtgtgt gtgtgtgtgt aggtcaaggg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss44956671	mCV22612947	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss145714297	ENSMUSSNP3735206	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss320054290	CHEV_1_152998869	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs30713272					SNP	C	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151027490 () rs orientation: forward

Symbol	Name	Function Class
Gm36139	predicted gene, 36139	within coordinates
Gm70948	predicted gene, 70948	within coordinates
Rr420238	regulatory region 420238	1385 bp proximal