rs30714346 SNP Detail

Summary

• ID
  rs30714346
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:160763421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atgagtaca ctgtagctgt cttcagatac
  accagaagat ggcatcagat cccatctgat gggatggttg tgagccacca tgtggttgct
  gggaattcag gacctctctc tggaagagta gtcagtgctc ttaactacta agccatcgct
  Y
  cagccccCAG CTGTTAAATT TTTATTCGTT AACAGTCTTT CAGAAGATGG GGTTGGGGTG
  GGGGTGTATA TTGAGTGGAT GAGAACAGAA TAAGTTCTTT GCATTGACTC TGAACCAGAT
  AGGAAGTAGC AAATTAAATG TACAAGATAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44956473	mCV22664682	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss145902345	ENSMUSSNP205247	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss320079951	CHEV_1_162865982	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30714346					SNP	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:160763421 () rs orientation: forward

Symbol	Name	Function Class
Rc3h1	RING CCCH (C3H) domains 1	Intron
Rr421728	regulatory region 421728	1825 bp distal
Rr421729	regulatory region 421729	1401 bp distal
Rr421730	regulatory region 421730	1515 bp distal
Rr421731	regulatory region 421731	1278 bp distal
Rr421732	regulatory region 421732	102 bp distal