rs30716761 SNP Detail

Summary

• ID
  rs30716761
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115437069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAT GGAAGTCCAC TGCAGTAGGG
  W
  AACCTGTGTG TTCTTTTTTT TAAGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45459184	mCV24998120	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss135663641	ENSMUSSNP325638	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320892529	CHEV_3_115346338	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30716761					SNP	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115437069 () rs orientation: forward

Symbol	Name	Function Class
Gm40124	predicted gene, 40124	1824 bp upstream
Rr65100	regulatory region 65100	1332 bp proximal
Rr367536	regulatory region 367536	982 bp downstream
Rr367537	regulatory region 367537	414 bp downstream
Rr397953	regulatory region 397953	1072 bp upstream
Tssr35264	transcription start site region 35264	1889 bp upstream
Tssr35265	transcription start site region 35265	1866 bp upstream