rs30721336 SNP Detail

Summary

• ID
  rs30721336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGACGAAACC ACTAAAAAAC GTGAAAAATG AGAAATGCAC ACTGAAGGAC CTGGAATATG
  GCGAGAAAAC TGAAAATCAC GGAAAATGAG AAATACACAC TTTAGAACGT GAAATATGGA
  GAGGAAAACT GAAAAAGGTG GAAAATTTAG AAATCTCCAC TGTAGGACGT GGAATATGGC
  AAGAAAAGTG AAAATCATGG AAAATGAGAA ACATCCACTT GACGACTTGA AAAATGACGA
  AATCACTAAA AAACGTGAAA AATGAGAAAT GCACACTGAA GGACCTGGAA TATCGCAAGA
  R
  AACTGAAAAT CACGGAAAAT GAGAAATACA CACTTTAGGA CGTGAAATAT GGCGAGGAAA
  ACTGAAAAAG GTGGAAAATT TAGAAATGTC CACTGTAGGA CGTGGAATAT GGCAAGAAAA
  CTGAAAATCT CGGAAAATGA GAAATACACA TTTTAGGACA TGAAATATGG CGAGGAAAAC
  TTAAAAAGGT GGAATATTTA GAAATGTCCA CTGTAGGTCC TGACATATGG CAAGAAAACT
  GAAAATCATG GAAAATGAGA AACATCCACT TGATGACTTG AAAAATGACG AAATCACTAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46436657	mCV22830883	ABI	CRAMUS_MOUSE	f	SNP			A	G
ss46440608	mCV22814051	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30721336					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050454 () rs orientation: forward

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1872 bp downstream
Tssr4285	transcription start site region 4285	1847 bp upstream
Tssr4286	transcription start site region 4286	1743 bp downstream
Tssr4287	transcription start site region 4287	1708 bp upstream
Tssr4288	transcription start site region 4288	1680 bp downstream
Tssr4289	transcription start site region 4289	1585 bp upstream
Tssr4290	transcription start site region 4290	1578 bp downstream
Tssr4291	transcription start site region 4291	1498 bp upstream
Tssr4292	transcription start site region 4292	1462 bp downstream
Tssr4293	transcription start site region 4293	1427 bp upstream
Tssr4294	transcription start site region 4294	1425 bp downstream
Tssr4295	transcription start site region 4295	1352 bp upstream
Tssr4296	transcription start site region 4296	1389 bp downstream
Tssr4297	transcription start site region 4297	1325 bp upstream
Tssr4298	transcription start site region 4298	1307 bp downstream
Tssr4299	transcription start site region 4299	1267 bp downstream
Tssr4300	transcription start site region 4300	1229 bp downstream
Tssr4301	transcription start site region 4301	1211 bp upstream
Tssr4302	transcription start site region 4302	1199 bp upstream
Tssr4303	transcription start site region 4303	1144 bp downstream
Tssr4304	transcription start site region 4304	1115 bp upstream
Tssr4305	transcription start site region 4305	1046 bp downstream
Tssr4306	transcription start site region 4306	1027 bp upstream
Tssr4307	transcription start site region 4307	1006 bp downstream
Tssr4308	transcription start site region 4308	974 bp upstream
Tssr4309	transcription start site region 4309	930 bp upstream
Tssr4310	transcription start site region 4310	883 bp downstream
Tssr4311	transcription start site region 4311	855 bp upstream
Tssr4312	transcription start site region 4312	775 bp downstream
Tssr4313	transcription start site region 4313	716 bp upstream
Tssr4314	transcription start site region 4314	704 bp downstream
Tssr4315	transcription start site region 4315	680 bp downstream
Tssr4316	transcription start site region 4316	653 bp upstream
Tssr4317	transcription start site region 4317	577 bp downstream
Tssr4318	transcription start site region 4318	553 bp upstream
Tssr4319	transcription start site region 4319	496 bp upstream
Tssr4320	transcription start site region 4320	432 bp downstream
Tssr4321	transcription start site region 4321	404 bp upstream
Tssr4322	transcription start site region 4322	305 bp downstream
Tssr4323	transcription start site region 4323	270 bp upstream
Tssr4324	transcription start site region 4324	240 bp downstream
Tssr4325	transcription start site region 4325	189 bp downstream
Tssr4326	transcription start site region 4326	151 bp upstream
Tssr4327	transcription start site region 4327	148 bp downstream
Tssr4328	transcription start site region 4328	66 bp downstream
Tssr4329	transcription start site region 4329	68 bp upstream
Tssr4330	transcription start site region 4330	35 bp upstream
Tssr4331	transcription start site region 4331	59 bp downstream
Tssr4332	transcription start site region 4332	165 bp downstream
Tssr4333	transcription start site region 4333	177 bp upstream
Tssr4334	transcription start site region 4334	199 bp downstream
Tssr4335	transcription start site region 4335	346 bp downstream
Tssr4336	transcription start site region 4336	350 bp upstream
Tssr4337	transcription start site region 4337	423 bp downstream