rs30722988 SNP Detail

Summary

• ID
  rs30722988
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95182597 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GAGTC ACATATTTTT CCTAAACGAG
  R
  AGGACAGTGT CTTCTAAGTT GGGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	DBA/2J
ss46439289	mCV25314953	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss135510431	ENSMUSSNP3086503	ENSEMBL	ENSEMBL_Sanger	r	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	DBA/2J
rs30722988					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95182597 () rs orientation: reverse

Symbol	Name	Function Class
Prune1	prune exopolyphosphatase	Intron
Rr580881	regulatory region 580881	1529 bp distal
Rr580882	regulatory region 580882	1081 bp distal
Rr580883	regulatory region 580883	622 bp distal
Rr580884	regulatory region 580884	1671 bp proximal