rs30723895 SNP Detail

Summary

• ID
  rs30723895
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:3036078 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  AAATCACGGA AAATGAGGAA TACAAACATT AGGACATGAA ATATGGCGAG GAAAACTGAA
  AATCACGGAA AATGAGAAAT ACACACTTTA GGACGTGAAA TATGGCGAGG AAAAATGAAA
  AAAGTGGAAA ATTTAGAAAT GTCCACTGTA GGACATGGAA TATGGCAAAA AAACTGAAAA
  TCATGGAATA TGAGAATCAT CCACTTGACG ACATGAAAAA TGACGAAATA ACTGAAAAAC
  GTGAAAAATG AGAAATATAC ACTGTAGGAC CTGTAATATG GCGAGAAAAC TGAAAATCAC
  R
  GAAAATCAGA AATACACACT TTAGGACGTG AAATATGGCG AGGAAAACTG AAAAAAGCTG
  GAAACTAGGA TATGTCTACT GTAGGACAAG GAATATGGCA AGAAAACTGA AAATCATGGA
  AAATGAGAAA CATCTACTTG ACGACTTGAA AAATGACGAA ATCAGTGAAA AACGTGAAAA
  ATGAGAAATG CACACTGTAG GACCTGGAAT ATGGCGAGAA AACTTAAAAT CATGGAAAAT
  GAGAAATACA CACTTTAGGA CATGAAATAT GGCGAGGAAA ACTGAAAAAG CTGTAAAATT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J
ss46438898	mCV22729899	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J
rs30723895					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:3036078 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi21328	CpG island 21328	within coordinates
Cpgi21329	CpG island 21329	1930 bp proximal
Tssr83597	transcription start site region 83597	1869 bp downstream
Tssr83598	transcription start site region 83598	341 bp downstream
Tssr83599	transcription start site region 83599	175 bp downstream
Tssr83600	transcription start site region 83600	within coordinates
Tssr83601	transcription start site region 83601	237 bp upstream
Tssr83602	transcription start site region 83602	278 bp upstream
Tssr83603	transcription start site region 83603	320 bp upstream
Tssr83604	transcription start site region 83604	1252 bp upstream
Tssr83605	transcription start site region 83605	1935 bp upstream
Tssr88025	transcription start site region 88025	156 bp upstream
Tssr88026	transcription start site region 88026	15 bp downstream
Tssr88027	transcription start site region 88027	269 bp downstream
Tssr88028	transcription start site region 88028	308 bp downstream
Tssr88029	transcription start site region 88029	1966 bp downstream