rs30725718 SNP Detail

Summary

• ID
  rs30725718
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:119911803 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAACTATCT TGTTCTTTAA TATGGAAATG TTGCCAATGT
  AAGTATAACT TTGAGTTTGA AAGAATAAGG GGTCCATCTT AAATTCCACA TCTATTACGT
  R
  GTTATAAGTA TTTTGAGAAT TGTGGTTATT ATTATTAATA AAATTTCTAA TGCCCAACTA
  TCAAAATAAA ATACAATGCA AGCATATTTT TAAAAAGAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46437672	mCV22556079	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss138915085	ENSMUSSNP2024046	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			A
ss324207702	CHEV_12_121186541	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30725718					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:119911803 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5238	CpG island 5238	1318 bp distal
Rr474318	regulatory region 474318	1648 bp distal
Tmem196	transmembrane protein 196	within coordinates
Tssr115576	transcription start site region 115576	1935 bp downstream