rs30740368 SNP Detail

Summary

• ID
  rs30740368
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:146439316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCCACCCAAC TATCTATTTA TCTACCTCAT ATCATCAACT TTGATTTAAT CTTGACACAG
  AAGGCCATAC CTGATGACAG GGAAGATGGA GAGTGGACAA ATGAATGATC GGGCAGCAGC
  TCACTGTGTC AAGGTCATCC CCAGTGTGTT CCTGAAACCA TAGGAACTCA GAAGGTTGAG
  GCAGGGGGAT CATCATACTC TCAAGGCCTA TCTGTGCTAC AGAATGAATC CATGGCTAGC
  CCGAGCCTTG TGTGGGACTC TGTTTCTAGT GAAAAGCAAG AGGAGGCTTG GGGTTTACAC
  S
  GCACTGGCAG TGTGCTTGCT TAGCTGTGTG TAGCCATAGG TTCAATCCCT GCCATGGAAG
  ACAAGGAAGA GAGAAGAGAG GGAGGGAGAA AGAGGGGGGA ATTTATTTTC ACAGAAATTT
  TATGGAGCAG CTGGGGAACT AGAGCATGAG ACCTTTGGCT TGTTCCTCAG CACTCAAAGA
  AGG                                                              
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45959089	mCV24946855	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs30740368					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:146439316 () rs orientation: forward

Symbol	Name	Function Class
Rr134091	regulatory region 134091	1285 bp proximal
Rr139420	regulatory region 139420	within coordinates
Rr400056	regulatory region 400056	417 bp upstream