rs30740695 SNP Detail

Summary

• ID
  rs30740695
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:22188548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATTTCCC ACTTACATCT
  TGTGTCATCT TTCTAAATTC CATTATTTTT CTTTATTTGG TTTAAAATTA TTGATTAAAA
  TAGGTTTTTT GGATTATTAT CAGACAAGTT TATCCACTTT AGTATTTCTG GATTTGCTTA
  CTAGAAAACT ATGAATTTTG TGTGTGCATA TGGGTATGGT ATATTACTTG CCTCTGCGTG
  Y
  ATGCCCACAG ATATGCAGAC TATGCTGGAA GACAATGTTG AATTGTTTTT CACCTTGATT
  TTTTGAGACA GGGTCTCTAA CTAATCCTTA AGATTGCCAT TTTAGCTAGG CTGGCCAGTT
  GTTGAACCCC TGGAATCTGC CTGGCTCTGC CTCTTGACCC AGTCCTTGGC TTTTGGACAT
  GAATGGTCAT ACCAGACTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49165991	NES12518016	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30740695					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49165991	NES12518016	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:22188548 () rs orientation: forward

Symbol	Name	Function Class
Lrmda	leucine rich melanocyte differentiation associated	within coordinates
Rr287589	regulatory region 287589	948 bp distal
Rr294686	regulatory region 294686	1876 bp proximal
Tssr124488	transcription start site region 124488	1690 bp upstream
Tssr124489	transcription start site region 124489	1777 bp upstream
Tssr124490	transcription start site region 124490	1853 bp upstream