rs30746250 SNP Detail

Summary

• ID
  rs30746250
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:120301992 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGTTCCAA ATGTCTTAGT
  TCATAGCATG TTATTGAATT TGGGACCCCA CTCTGTACCC CAAAAGTCAA ATCTAACCAC
  TGTCCCTGAG AAGTCAATTA AAGAAGCCAG ATTTATAGAC AGGAGCTGAA TAGAGATTAA
  AATTTAAATA GAGAGTGAGG GGTATGCACA TCTAAACAGT TCAGATCTAG GTGTGGCCCC
  R
  CCGACCATCG ACGTCATTGT CTGGACTCAG TCTCTTCCGG GAAGGTGCCT CACAGAATCT
  TTTTTCCAGA ATAAGAGTCC CCTCTGGATG TTATCTCTCT CTTCTTCCAG CATGAGGTTC
  CTCGGCAAAC TCTTATTTCT TTGTGTCCAT GATCCTAACA ATCTGATAGA TGGAGAGACA
  CAAGTGTTTC TTTCAAATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49666866	NES12997054	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30746250					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49666866	NES12997054	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:120301992 () rs orientation: forward

Symbol	Name	Function Class
Rr371940	regulatory region 371940	within coordinates